D-Glyceraldehyde-3-Phosphate Dehydrogenase 4 (E.C.1.2.1.12)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-30
ASN-31
10.1
10.2
8.1
5.2
73.9
74.8
111.8
ASN-31
ASP-32
13.2
13.4
-10.9
-24.3
71.5
80.5
130.5
ASP-32
LEU-33
14.3
14.1
-74.5
49.8
115.2
142.2
-271.7
LEU-33
THR-34
17.2
16.9
-41.3
71.9
146.9
123.1
262.9
THR-34
ASP-36
15.9
15.3
-48.5
34.8
130.4
145.5
-105.8
ASP-36
ALA-37
13.6
14.1
-29.8
6.5
81.2
84.0
13.5
ALA-37
ASN-38
9.9
10.3
-1.0
10.5
104.8
106.9
48.4
ASN-38
THR-39
9.9
10.5
-7.5
8.1
39.4
37.2
-16.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-53
ASP-54
7.8
7.5
15.8
-2.7
124.3
124.2
-95.6
ASP-54
ALA-55
9.1
8.9
-20.8
5.6
69.2
60.0
56.5
ALA-55
GLU-56
6.7
6.5
-15.8
5.1
32.1
40.0
79.5
GLU-56
VAL-57
5.0
5.2
17.3
-2.5
83.2
81.8
20.6
VAL-57
SER-58
2.5
2.6
15.1
-10.1
149.5
147.7
-43.3
SER-58
VAL-59
2.2
2.5
-9.9
10.6
95.3
98.5
-146.4
VAL-59
ASN-60
4.8
5.2
0.6
-1.1
143.8
144.6
68.8
ASN-60
GLY-61
6.2
6.5
-3.6
-16.0
98.4
96.5
-76.1
GLY-61
ASN-62
9.8
10.2
26.2
-4.7
42.8
27.5
204.1
ASN-62
ASN-63
11.3
11.4
-13.2
5.8
142.9
130.3
-36.6
ASN-63
LEU-64
8.9
8.7
3.3
1.8
89.8
90.2
-68.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-149
THR-150
6.5
6.4
-12.1
0.2
29.4
26.3
135.2
THR-150
THR-151
8.2
7.9
-4.3
5.4
46.2
47.8
-52.1
THR-151
ASN-152
5.9
5.5
-4.6
3.4
101.0
102.8
-24.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-315
GLY-316
5.9
5.9
2.6
8.5
46.7
43.2
110.1
GLY-316
TYR-317
4.7
4.8
-9.5
1.2
93.7
91.6
-47.8
TYR-317
SER-318
2.8
2.6
-3.3
6.1
40.1
39.3
9.8
SER-318
HIS-319
1.7
1.4
-0.6
-1.3
90.2
91.7
-59.3
HIS-319
ARG-320
2.2
2.7
0.2
10.1
47.0
51.5
38.1
ARG-320
VAL-321
2.2
2.3
-15.0
3.1
68.9
71.5
59.1
VAL-321
VAL-322
4.0
4.1
-4.4
2.1
60.9
59.9
-3.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees