Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-67   PHE-68  6.6 6.2 -12.1 14.6 113.8 118.2 3.9
 PHE-68   LEU-69  3.6 3.6 -20.9 7.6 151.8 141.3 -4.6
 LEU-69   THR-70  2.5 2.0 -25.6 11.5 138.3 142.2 201.5
 THR-70   MET-71  5.4 5.2 -7.1 1.6 108.5 128.1 -3.6
 MET-71   MET-72  5.4 5.2 -20.0 14.0 121.6 121.8 -2.5
 MET-72   ALA-73  2.3 2.5 -6.5 14.1 156.4 135.7 2.4
 ALA-73   ARG-74  2.2 1.7 5.6 -15.8 53.1 29.4 -4.7
 ARG-74   LYS-75  5.3 3.9 -30.3 1.4 99.1 115.1 -9.8
 LYS-75   MET-76  5.6 4.7 47.2 51.2 23.8 64.3 -147.1
 MET-76   LYS-77  4.0 2.7 -175.6 -10.1 99.6 155.8 100.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees