Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-363   ALA-364  6.5 6.9 6.2 -9.2 20.8 25.3 -18.9
 ALA-364   ILE-365  6.8 7.1 0.0 -11.1 77.4 74.6 33.5
 ILE-365   ASN-366  6.7 6.8 -6.6 10.0 140.5 129.0 -58.9
 ASN-366   VAL-367  6.6 6.6 -16.6 -10.6 73.4 64.8 127.7
 VAL-367   GLY-368  7.5 7.5 22.7 -14.9 51.0 52.6 -11.3
 GLY-368   LEU-369  9.5 8.9 24.6 -23.9 85.5 68.1 -58.2
 LEU-369   SER-370  11.4 11.0 -11.0 24.5 30.9 43.0 -65.4
 SER-370   VAL-371  12.1 12.1 9.4 16.9 111.9 108.8 -254.1
 VAL-371   SER-372  14.8 15.3 -19.2 -25.4 34.0 20.2 392.0
 SER-372   ARG-373  16.8 17.0 -28.1 22.4 96.9 86.4 24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-383   LYS-384  11.9 11.4 -9.8 10.0 136.8 138.3 -42.2
 LYS-384   GLN-385  15.2 14.7 -7.1 -0.4 97.5 109.2 29.5
 GLN-385   VAL-386  15.8 15.5 -2.0 -7.7 131.0 126.9 -170.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-423   LEU-424  9.1 9.1 -1.5 -2.8 115.9 117.4 44.4
 LEU-424   THR-425  7.1 7.0 6.0 -4.2 99.6 104.6 -40.6
 THR-425   GLU-426  4.1 4.1 -3.6 0.5 126.1 125.9 -30.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-444   ILE-445  6.5 6.2 -13.0 6.3 142.0 141.3 -152.9
 ILE-445   TYR-446  7.6 7.4 -10.9 7.3 85.3 85.0 69.9
 TYR-446   ALA-447  11.0 10.8 3.9 -0.5 66.7 72.3 4.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees