Cyclin Dependent Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-32   LYS-33  8.9 9.1 -7.6 -6.3 106.5 104.4 -30.7
 LYS-33   LYS-34  10.2 10.5 -5.7 6.9 84.4 83.5 -20.9
 LYS-34   ILE-35  13.9 14.1 -40.3 65.3 76.2 76.1 -47.9
 VAL-44   PRO-45  22.2 23.1 42.6 1.9 92.5 157.9 -113.6
 PRO-45   SER-46  20.9 23.8 2.0 3.3 151.4 135.1 -28.0
 SER-46   THR-47  20.6 22.8 -3.0 -1.0 97.1 64.4 12.3
 THR-47   ALA-48  17.8 21.3 -0.3 -6.0 83.2 119.5 -15.7
 ALA-48   ILE-49  15.7 18.9 22.0 -13.2 167.1 99.6 -40.1
 ILE-49   ARG-50  16.5 18.0 3.9 -5.5 117.1 143.3 -8.1
 ARG-50   GLU-51  15.4 16.7 -17.3 26.9 106.7 99.6 43.4
 GLU-51   ILE-52  12.2 15.3 -1.9 -29.9 64.6 119.5 14.7
 ILE-52   SER-53  11.2 12.8 41.5 -9.0 158.5 118.2 -130.0
 SER-53   LEU-54  11.5 12.4 -19.1 15.2 82.6 52.6 38.9
 LEU-54   LEU-55  10.1 10.7 27.7 -6.8 83.6 60.3 36.3
 LEU-55   LYS-56  6.8 8.6 11.1 -11.9 130.4 86.3 -22.1
 LYS-56   GLU-57  6.5 7.0 14.8 -10.1 131.2 136.4 -28.1
 GLU-57   LEU-58  5.5 5.3 -2.4 22.9 108.8 98.8 46.5
 LEU-58   ASN-59  4.0 4.5 -9.1 5.6 108.2 126.2 -33.2
 ASN-59   HIS-60  0.7 1.2 38.9 -11.6 95.3 98.5 -37.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-63   VAL-64  4.6 4.8 -1.0 -7.2 66.9 61.3 21.4
 VAL-64   LYS-65  1.8 2.3 8.5 11.6 51.7 55.6 55.6
 LYS-65   LEU-66  1.2 1.6 3.1 -15.2 112.3 111.2 22.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-81   PHE-82  4.1 3.5 16.0 -14.4 29.2 29.5 -2.1
 PHE-82   LEU-83  3.6 2.8 -0.1 -1.8 98.5 95.1 -0.3
 LEU-83   HIS-84  3.5 2.9 5.6 -24.1 9.2 8.5 -93.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees