Uracil Permease
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-152
THR-153
24.0
26.6
9.7
-77.7
59.5
43.2
-27.2
THR-153
PRO-154
22.3
25.2
30.3
-26.6
55.9
104.1
-2.6
PRO-154
ASP-155
20.2
21.7
45.1
-8.2
105.6
100.5
-10.8
ASP-155
SER-156
16.5
21.2
37.0
1.8
46.9
20.3
23.8
SER-156
LYS-157
16.0
23.0
7.5
13.5
72.7
54.4
7.3
LYS-157
THR-158
12.2
20.0
-17.1
3.3
124.0
119.8
-5.9
THR-158
ILE-159
12.1
17.8
6.8
8.9
15.9
45.0
11.9
ILE-159
ILE-160
13.8
21.0
-6.4
2.1
117.1
145.3
-3.0
ILE-160
ILE-161
12.0
21.0
-16.2
18.6
107.3
120.6
-0.3
ILE-161
SER-162
8.5
17.3
-1.4
2.8
138.3
121.0
1.4
SER-162
ILE-163
10.1
17.5
-13.5
20.6
155.1
144.5
4.6
ILE-163
THR-164
11.3
20.5
-24.1
-3.5
111.4
139.8
-17.3
THR-164
THR-165
8.4
19.4
18.9
-15.9
66.0
69.3
0.7
THR-165
LEU-166
6.1
15.8
6.6
-3.2
25.1
55.1
3.4
LEU-166
ALA-167
8.6
17.2
6.2
-4.5
46.4
30.4
1.5
ALA-167
VAL-168
8.6
19.5
-13.8
7.9
108.0
133.6
-4.0
VAL-168
THR-169
5.0
17.1
-6.6
-4.9
128.5
115.0
-7.6
THR-169
VAL-170
4.5
14.1
1.0
1.9
22.3
53.2
0.7
VAL-170
LEU-171
6.8
16.7
-5.5
3.1
121.5
150.5
-0.2
LEU-171
GLY-172
6.1
18.3
-1.0
-6.5
105.8
124.3
0.5
GLY-172
SER-173
2.5
15.2
37.2
-38.1
32.7
63.5
-0.6
SER-173
VAL-174
2.4
13.9
-26.0
40.3
149.0
135.1
10.0
VAL-174
LEU-175
3.9
17.0
21.5
-16.0
79.5
40.1
-1.8
LEU-175
PHE-176
5.1
17.0
15.6
-88.8
85.7
59.5
-0.1
PHE-176
ARG-177
4.0
13.5
9.4
74.6
26.4
106.9
23.3
ARG-177
GLY-178
5.1
9.8
-130.5
-160.7
73.6
36.7
-38.7
GLY-178
PHE-179
7.6
10.0
-172.5
-48.7
52.8
42.5
116.9
PHE-179
LEU-180
8.3
8.6
-22.5
-16.6
50.2
83.0
28.0
LEU-180
ALA-181
5.5
5.1
7.2
-16.0
67.8
91.0
-1.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-198
MET-199
6.1
5.5
-7.1
34.0
118.4
124.7
13.1
MET-199
GLY-200
6.8
6.0
-58.2
-139.5
149.9
166.8
117.5
GLY-200
ILE-201
4.5
3.9
-58.9
22.0
95.2
116.1
-10.7
ILE-201
VAL-202
4.7
5.4
-6.2
4.7
91.0
105.0
-2.2
VAL-202
ASP-203
2.4
8.7
-147.7
7.1
158.1
161.8
-104.7
ASP-203
THR-204
4.4
8.4
-90.5
-21.2
90.0
131.4
149.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees