Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-109   GLY-110  8.9 9.0 0.6 0.0 161.7 162.9 -98.7
 GLY-110   ILE-111  8.7 8.8 1.3 1.1 123.4 123.1 -10.0
 ILE-111   SER-112  6.4 6.5 0.3 1.9 98.0 97.6 -4.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   THR-195  4.0 4.1 -1.1 -0.4 25.3 24.5 54.5
 THR-195   MET-196  3.1 3.2 1.0 0.3 89.2 89.7 20.4
 MET-196   ASN-197  1.5 1.5 0.6 -0.1 68.3 68.5 -34.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-204   PRO-205  13.7 13.6 -0.5 -1.3 43.0 38.0 50.2
 PRO-205   CYS-206  15.4 15.3 -0.1 1.2 70.5 73.7 34.1
 CYS-206   ASP-207  13.5 13.5 -1.3 -2.5 17.1 19.7 117.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-214   LEU-215  9.6 9.7 -0.1 0.9 142.1 142.4 -3.8
 LEU-215   ASP-216  10.1 10.1 1.8 -0.9 101.0 101.1 41.2
 ASP-216   SER-217  12.2 12.3 -1.7 2.4 4.1 6.0 -59.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-249   LEU-250  7.7 7.8 0.0 -0.8 75.8 78.7 -6.9
 LEU-250   LYS-251  4.8 4.8 -1.5 -0.9 24.5 26.3 110.7
 LYS-251   ASN-252  4.8 4.7 1.6 1.7 87.3 86.9 45.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-256   ASP-257  7.1 7.1 -2.8 2.7 34.8 34.5 -47.0
 ASP-257   LYS-258  7.6 7.8 1.5 -0.2 89.1 89.5 51.9
 LYS-258   GLY-259  7.1 7.3 -0.8 2.0 151.4 151.0 79.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees