Adp-Ribosylation Factor 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-34   TYR-35  12.9 13.6 2.8 7.0 77.0 79.9 -0.6
 TYR-35   LYS-36  16.0 16.8 0.4 -6.7 127.1 135.6 14.5
 LYS-36   LEU-37  16.8 17.3 3.0 -8.4 152.7 150.0 24.0
 LEU-37   LYS-38  16.1 16.3 14.8 -36.4 88.3 93.3 -24.1
 LYS-38   LEU-39  18.8 19.1 42.9 127.1 98.5 83.7 11.1
 LEU-39   GLY-40  21.2 21.3 60.2 152.4 160.0 33.6 328.3
 GLY-40   GLU-41  20.7 22.1 26.2 1.5 128.2 83.5 -113.0
 GLU-41   ILE-42  21.7 24.2 -22.6 -18.4 94.9 124.9 -327.6
 ILE-42   VAL-43  25.3 24.5 177.2 -49.8 74.7 101.3 -82.2
 VAL-43   THR-44  25.2 26.2 37.4 4.8 12.9 29.5 290.3
 THR-44   THR-45  25.8 27.3 -31.2 18.3 98.1 60.2 25.2
 THR-45   ILE-46  25.0 25.9 -1.4 15.7 154.3 133.1 81.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-63   THR-64  12.2 11.3 -2.5 -21.6 35.6 28.6 140.7
 THR-64   VAL-65  13.6 11.4 27.9 24.2 129.0 126.4 -129.9
 VAL-65   TRP-66  11.0 9.3 2.3 -2.1 152.4 103.8 25.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees