Putative Phosphoglycolate Phosphatase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-130   VAL-131  2.5 3.2 10.6 3.7 41.9 54.5 106.3
 VAL-131   SER-132  1.3 1.4 34.3 -14.9 75.3 82.7 13.9
 SER-132   ASN-133  2.7 2.8 -1.0 4.3 120.7 127.0 -11.1
 ASN-133   LYS-134  5.9 5.9 17.7 -27.8 129.7 125.0 57.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-150   PHE-151  6.8 6.8 3.3 -9.2 156.4 148.2 40.3
 PHE-151   ASP-152  6.8 7.1 9.3 -5.8 99.0 88.8 14.2
 ASP-152   PHE-153  9.7 10.0 -8.1 9.4 54.3 56.9 -6.1
 PHE-153   ALA-154  7.7 8.3 4.8 8.1 92.4 100.0 -29.1
 ALA-154   LEU-155  4.7 5.3 11.3 -5.2 122.4 128.0 -32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-162   ARG-163  7.9 7.9 30.1 8.8 49.7 74.5 119.0
 ARG-163   LYS-164  5.9 5.7 -14.9 2.9 66.8 61.5 27.2
 LYS-164   PRO-165  2.7 2.4 0.4 2.2 132.1 129.7 -26.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees