Host Factor For Q Beta

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-32   LYS-33  4.8 4.5 34.1 -31.8 91.3 86.8 17.2
 LYS-33   GLY-34  7.3 7.1 1.5 -7.4 156.3 159.6 140.7
 GLY-34   VAL-35  8.6 8.3 -11.4 4.1 79.2 79.8 47.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-56   LYS-57  7.1 7.3 -3.6 8.7 27.7 24.3 -74.3
 LYS-57   HIS-58  8.4 8.5 -8.6 3.7 51.6 48.2 117.8
 HIS-58   ALA-59  10.6 10.5 -3.5 13.3 57.3 61.2 -158.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees