Hypothetical Protein Yhfz

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-93   VAL-94  6.2 6.1 12.3 -11.1 108.9 106.8 17.1
 VAL-94   GLY-95  6.5 5.4 -6.1 -6.6 69.9 77.0 8.9
 GLY-95   GLU-96  5.8 4.3 8.7 4.3 165.1 165.7 -32.2
 GLU-96   HIS-97  4.8 4.4 -8.4 -11.2 55.9 57.9 45.6
 HIS-97   GLN-98  6.7 6.1 -7.0 5.6 41.1 45.5 -12.7
 GLN-98   LEU-99  8.0 8.2 -19.0 2.7 41.9 39.4 43.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-174   PRO-175  9.6 10.2 -10.0 12.4 54.9 63.6 -2.5
 PRO-175   LEU-176  6.9 7.3 -12.8 2.2 128.3 126.8 1.1
 LEU-176   THR-177  3.4 3.8 -20.9 -80.2 106.8 65.7 8.2
 THR-177   ASP-178  2.3 4.0 -121.0 -122.3 69.3 132.8 6.1
 ASP-178   ASP-179  4.1 4.6 -10.3 -24.4 68.2 86.6 3.2
 ASP-179   PRO-180  4.4 3.6 -3.7 -3.7 9.3 19.9 29.3
 PRO-180   ARG-181  6.1 6.1 -7.5 6.9 68.0 60.5 -11.8
 ARG-181   PHE-182  6.3 5.9 -1.0 6.5 65.2 55.9 -20.1
 PHE-182   LEU-183  3.3 2.6 -14.6 17.9 15.0 18.2 -7.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees