Pantothenate Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-113   ALA-114  6.6 6.8 0.8 -26.1 104.4 107.7 19.4
 ALA-114   ASP-115  9.2 9.5 25.8 11.0 65.0 46.2 59.4
 ASP-115   VAL-116  7.9 9.0 26.8 -84.4 107.1 101.0 44.4
 VAL-116   LEU-117  4.6 7.6 13.9 -6.9 128.8 161.0 -28.2
 LEU-117   GLU-118  6.1 8.7 -8.9 40.4 105.5 65.0 -38.2
 GLU-118   GLY-119  9.5 10.5 -123.1 14.6 104.0 122.4 -129.7
 GLY-119   ALA-120  10.1 11.0 28.7 -3.4 85.2 46.1 25.2
 ALA-120   LYS-121  13.7 12.4 -39.9 -0.7 42.5 65.2 62.0
 LYS-121   ARG-122  14.7 14.7 -17.1 46.7 54.5 64.8 -41.1
 ARG-122   PRO-123  15.5 15.7 25.8 -3.7 65.9 59.9 26.5
 PRO-123   GLY-124  15.2 16.4 -2.9 -4.4 63.3 60.5 10.8
 GLY-124   HIS-125  16.9 17.7 -12.1 15.4 5.3 18.2 -8.3
 HIS-125   PHE-126  15.7 16.1 -14.8 10.7 69.7 78.5 6.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-175   ILE-176  2.1 1.6 16.2 -4.3 118.8 109.8 -10.3
 ILE-176   VAL-177  2.2 2.8 -10.0 -25.9 31.8 19.6 93.4
 VAL-177   ARG-178  3.4 3.8 -5.6 -5.4 98.3 91.1 -9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees