Fab Fragment Of Murine Monoclonal Antibody An02 Complex 3 With Its Hapten (2,2,6,6-Tetramethyl-1-Piperidinyloxy- 4 Dinitrophenyl)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-104   GLU-105  3.4 3.5 1.3 6.6 75.0 81.2 26.6
 GLU-105   LEU-106  0.4 0.4 -16.8 10.1 33.0 33.2 21.9
 LEU-106   LYS-107  3.5 3.4 -5.6 -10.4 69.7 74.1 42.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees