Camp-Dependent Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-28   LYS-29  10.3 10.5 -6.0 13.6 102.9 98.0 20.9
 LYS-29   TRP-30  7.0 7.4 -1.3 5.7 65.3 63.1 -53.6
 TRP-30   GLU-31  5.6 6.0 0.3 -19.7 159.1 154.4 92.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-94   LEU-95  5.0 4.7 -2.5 -0.5 31.5 38.9 19.7
 LEU-95   GLN-96  3.2 2.6 -8.0 -3.5 92.2 99.4 23.3
 GLN-96   ALA-97  1.9 2.4 24.0 -14.1 75.2 68.1 35.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  3.0 3.0 9.0 -7.9 133.8 141.5 -3.7
 LYS-105   LEU-106  1.8 2.2 18.4 -17.5 116.1 112.1 15.8
 LEU-106   GLU-107  1.9 2.2 -12.7 6.5 83.7 87.0 -17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-120   GLU-121  4.1 3.8 8.0 -10.5 153.7 154.1 -24.4
 GLU-121   TYR-122  3.2 3.1 0.6 -6.3 125.3 132.5 -19.4
 TYR-122   VAL-123  4.4 3.9 6.6 -19.2 129.3 132.1 43.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-314   ILE-315  10.0 10.5 30.6 -33.0 115.6 114.1 -18.3
 ILE-315   PRO-316  6.2 6.8 -17.6 23.4 99.3 103.2 -2.7
 PRO-316   LYS-317  4.6 5.8 -7.4 -49.8 113.9 111.4 -170.5
 ASP-328   ASP-329  15.9 21.6 -21.0 17.1 67.9 33.7 17.5
 ASP-329   TYR-330  18.1 19.7 51.3 42.5 139.2 153.3 -525.3
 TYR-330   GLU-331  19.9 20.7 15.2 -36.0 99.1 101.9 -4.6
 GLU-331   GLU-332  23.0 23.8 -36.1 48.1 47.7 38.9 31.9
 GLU-332   GLU-333  22.3 22.8 54.2 -68.1 138.2 154.1 61.0
 GLU-333   GLU-334  23.5 24.0 69.2 -75.0 108.6 124.2 -13.7
 GLU-334   ILE-335  24.3 23.8 -17.4 49.3 25.0 25.1 -198.1
 ILE-335   ARG-336  22.3 21.4 6.9 3.0 128.7 124.8 -39.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees