Purine Repressor-Guanine-Purf-Operator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-157   VAL-158  10.7 11.0 -2.8 0.4 54.1 84.9 78.5
 VAL-158   ILE-159  7.3 8.2 -2.4 -7.4 66.8 41.4 32.8
 ILE-159   ASP-160  8.0 7.6 -30.0 -12.9 68.6 85.1 4.1
 ASP-160   ASN-161  7.2 6.9 150.6 -162.9 155.2 149.3 15.4
 ASN-161   ALA-162  8.7 8.0 28.0 -3.9 83.6 88.1 19.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-290   HIS-291  13.9 13.6 -12.7 20.6 39.7 42.6 -48.0
 HIS-291   GLN-292  11.3 11.1 -18.4 -3.2 83.6 86.4 30.5
 GLN-292   PRO-293  8.5 8.7 -11.5 -2.7 63.8 49.7 94.9
 PRO-293   LYS-294  5.7 5.7 19.8 -16.5 160.5 144.9 -49.4
 LYS-294   ASP-295  5.4 5.2 -20.9 9.5 63.0 63.2 91.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-317   SER-318  14.0 12.3 2.9 29.0 90.1 108.9 -25.4
 SER-318   ILE-319  11.0 9.7 7.0 3.8 125.6 89.3 14.6
 ILE-319   GLU-320  7.5 6.1 -20.0 -30.0 84.7 54.5 52.3
 GLU-320   VAL-321  5.6 4.2 -25.5 17.8 97.7 87.1 32.9
 VAL-321   HIS-322  2.6 2.0 -5.4 7.6 54.4 44.2 12.2
 HIS-322   PRO-323  4.1 3.9 -4.8 8.1 104.6 101.4 41.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees