Dengue 4 Ns3 Full-Length Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-167   ALA-168  3.8 4.0 5.3 1.5 139.6 150.5 -2.1
 ALA-168   GLU-169  2.9 3.6 23.3 -9.5 101.1 101.5 0.3
 GLU-169   ARG-170  5.0 5.2 -51.3 25.4 15.0 38.9 17.8
 ASP-175   TYR-176  5.0 3.1 90.4 -42.4 155.2 105.9 -23.7
 TYR-176   GLU-177  5.4 4.4 37.7 -20.5 102.8 121.4 2.5
 GLU-177   VAL-178  8.6 8.1 7.9 -19.7 166.6 137.0 7.0
 VAL-178   ASP-179  8.4 8.6 37.1 1.5 111.8 104.6 -5.8

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees