Glycerol Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-113   HIS-114  12.2 12.0 20.8 -22.6 41.8 36.7 -61.2
 HIS-114   LEU-115  10.3 10.0 22.5 -20.7 103.7 102.4 12.5
 LEU-115   LYS-116  7.1 6.8 18.6 -31.3 88.2 86.5 9.7
 LYS-116   ARG-117  8.1 7.8 14.9 -30.3 26.8 14.3 -234.9
 ARG-117   ASP-118  8.4 8.7 51.6 -15.6 74.6 59.5 499.2
 ASP-118   GLY-119  4.7 5.0 -110.5 113.5 58.1 79.6 -157.1
 ASP-118   GLY-119  4.7 5.0 -110.5 113.5 58.1 79.6 -157.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASP-118   GLY-119  4.7 5.0 -110.5 113.5 58.1 79.6 -157.1
 ASP-118   GLY-119  4.7 5.0 -110.5 113.5 58.1 79.6 -157.1
 GLY-119   LEU-120  4.8 4.5 -30.2 14.0 48.8 44.1 2.8
 LEU-120   GLU-121  2.4 2.1 31.4 -41.7 151.9 153.5 228.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-129   LEU-130  3.2 3.2 -12.1 -0.6 96.5 92.5 -8.1
 LEU-130   VAL-131  2.6 2.7 -27.2 33.0 49.2 40.5 29.6
 VAL-131   ILE-132  5.4 5.8 -23.8 15.1 63.2 63.8 46.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PHE-192   ASN-193  7.5 7.8 12.5 -6.8 90.5 87.3 -170.4
 ASN-193   ILE-194  7.7 7.5 9.7 0.9 158.9 159.0 -102.5
 ILE-194   HIS-195  7.4 7.1 -35.5 42.3 78.0 84.6 143.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-196   LEU-197  12.2 12.4 0.3 3.7 53.2 46.1 119.1
 LEU-197   ASP-198  11.7 11.5 -17.4 31.1 63.0 74.9 -103.4
 ASP-198   TRP-199  12.3 12.7 6.6 -10.4 131.6 125.8 123.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-202   MET-203  7.5 7.7 29.6 -7.4 99.6 106.5 -27.8
 MET-203   LEU-204  6.9 6.8 7.0 -19.9 82.0 80.6 47.1
 LEU-204   GLU-205  10.6 10.5 24.0 11.6 27.2 20.3 468.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-209   PRO-210  14.8 14.8 -9.2 10.8 89.2 83.5 28.6
 PRO-210   ARG-211  17.7 17.4 7.8 -11.3 31.6 28.8 -37.5
 ARG-211   GLU-212  17.3 17.2 7.0 -22.5 53.5 54.0 -134.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-244   ASP-245  7.0 7.3 -1.4 -8.0 35.2 38.5 154.4
 ASP-245   GLN-246  7.5 7.6 4.5 -19.2 92.9 105.4 150.5
 GLN-246   GLN-247  4.7 5.0 38.6 -38.2 106.9 96.8 -125.6
 GLN-247   ALA-248  2.2 2.4 15.0 -38.5 160.2 150.5 445.4
 ALA-248   ALA-249  4.6 4.4 51.4 -16.6 138.5 135.0 -515.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLN-253   LEU-254  1.8 1.8 -7.6 7.7 83.9 78.6 142.8
 LEU-254   CYS-255  3.8 4.0 -4.3 17.2 121.6 123.8 288.7
 CYS-255   VAL-256  5.4 5.5 -161.7 -172.8 122.1 114.5 36.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PHE-270   MET-271  8.8 8.9 -2.2 8.4 125.0 120.9 36.7
 MET-271   LEU-272  8.3 8.5 22.3 -31.4 117.6 117.4 15.1
 LEU-272   MET-273  5.5 5.9 -0.6 2.4 118.7 119.6 9.4
 MET-273   ASN-274  7.4 7.5 -0.3 9.1 108.1 107.3 101.5
 MET-273   ASN-274  7.4 7.5 -0.3 9.1 108.1 107.3 101.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 MET-273   ASN-274  7.4 7.5 -0.3 9.1 108.1 107.3 101.5
 MET-273   ASN-274  7.4 7.5 -0.3 9.1 108.1 107.3 101.5
 ASN-274   THR-275  7.4 7.3 -8.7 -1.3 117.0 115.0 -0.3
 THR-275   GLY-276  10.0 10.1 6.2 13.0 95.8 85.5 25.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-431   ARG-432  12.1 12.5 -4.6 6.4 86.4 87.6 -9.2
 ARG-432   PRO-433  10.8 11.1 25.6 -31.2 48.9 51.8 -50.2
 PRO-433   GLU-434  7.2 7.7 10.9 -25.7 41.0 58.3 -6.2
 GLU-434   VAL-435  6.6 8.0 32.0 -12.2 108.3 108.8 129.8
 VAL-435   ARG-436  6.0 7.1 -49.0 32.8 27.8 23.7 190.9
 ARG-436   GLU-437  8.2 9.0 -0.8 -28.4 47.7 33.6 396.6
 GLU-437   VAL-438  8.5 9.3 27.3 -31.6 116.3 93.8 -114.0
 VAL-438   THR-439  5.1 5.8 44.0 -18.0 139.4 144.0 -352.5
 THR-439   ALA-440  6.4 7.0 40.0 -51.6 69.4 78.4 -127.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-460   GLN-461  6.2 6.6 15.1 2.3 83.3 85.5 217.3
 GLN-461   GLU-462  6.0 6.3 -52.4 61.5 40.4 48.0 -150.4
 GLU-462   LYS-463  4.3 4.7 -25.3 10.4 95.6 96.6 75.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees