Rod Shape-Determining Protein Mreb

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-189   LYS-190  10.3 10.2 4.4 -2.1 152.7 157.3 -18.5
 LYS-190   MET-191  8.7 8.6 -0.1 4.2 79.1 82.8 -15.4
 MET-191   ASP-192  5.5 5.6 3.2 -7.9 109.5 111.6 51.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-259   ALA-260  0.7 0.5 6.4 -7.5 84.8 86.2 49.6
 ALA-260   GLU-261  3.0 3.1 3.0 3.4 87.4 86.5 -107.7
 GLU-261   PRO-262  4.7 4.8 -5.5 2.4 32.0 28.9 50.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees