Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-521
GLY-522
5.9
5.7
2.0
-0.2
19.8
23.0
23.1
GLY-522
ILE-523
5.5
5.3
-0.7
-5.2
81.2
79.7
53.1
ILE-523
SER-524
5.1
5.3
1.4
3.4
95.1
93.9
22.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
13.3
13.4
-2.0
-0.3
81.0
80.1
24.9
LEU-743
ILE-744
9.8
9.9
2.4
-11.2
166.4
172.0
151.7
ILE-744
ASP-745
8.2
8.5
16.7
-7.8
114.2
111.9
-80.5
ASP-745
SER-746
6.1
6.2
-3.1
-4.2
136.2
138.7
-55.8
SER-746
LYS-747
7.3
6.9
16.0
-13.1
86.4
95.0
50.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-781
LYS-782
9.3
9.5
1.8
-5.9
137.5
139.6
23.6
LYS-782
TRP-783
6.9
7.3
2.4
0.7
76.2
80.2
6.1
TRP-783
TRP-784
3.7
4.0
-2.7
9.5
115.7
112.2
-10.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees