70 Kda Peptidylprolyl Isomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-93   ARG-94  3.4 3.4 2.3 2.3 52.2 54.2 70.0
 ARG-94   ILE-95  2.6 2.7 -1.0 7.7 121.0 124.2 35.4
 ILE-95   GLU-96  1.0 0.8 6.6 13.3 45.0 41.2 55.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-116   LEU-117  4.8 4.9 -2.3 4.8 114.5 113.2 -88.1
 LEU-117   PHE-118  4.0 4.0 -1.5 10.9 160.0 156.6 101.1
 PHE-118   GLU-119  2.0 1.9 -13.8 24.8 119.0 119.4 -14.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees