Acetate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acetate Kinase
  Conformer 1
(PDB) 		1g99 (A)
  Conformer 2
(PDB) 		1tuu (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 266 1.43   90 - 101   107 - 122   147 - 384
2 122 0.5   3 - 89   102 - 106   129 - 146   385 - 396

Sequence


           _______________________________________________________________________________________89________100____________________ 
 1g99(A) : MKVLVINAGSSSLKYQLIDMTNESALAVGLCERIGIDNSIITQKKFDGKKLEKLTDLPTHKDALEEVVKALTDDEFGVIKDMGEINAVGHRVVHGGEKFTTSALYDEGVEKAIKDCFELA 
         :                                                                                                                          
 1tuu(B) : MKVLVINAGSSSLKYQLIDMTNESALAVGLCERIGIDNSIITQKKFDGKKLEKLTDLPTHKDALEEVVKALTDDEFGVIKDMGEINAVGHRVVHGGEKFTTSALYDEGVEKAIKDCFELA 
           _______________________________________________________________________________________89________100____________________ 

           _______________________146______________________________________________________________________________________________ 
 1g99(A) : PLHNPPNMMGISACAEIMPGTPMVIVFDTAFHQTMPPYAYMYALPYDLYEKHGVRKYGFHGTSHKYVAERAALMLGKPAEETKIITCHLGNGSSITAVEGGKSVETSMGFTPLEGLAMGT 
         :                                                                                                                          
 1tuu(B) : PLHNPPNMMGISACAEIMPGTPMVIVFDTAFHQTMPPYAYMYALPYDLYEKHGVRKYGFHGTSHKYVAERAALMLGKPAEETKIITCHLGNGSSITAVEGGKSVETSMGFTPLEGLAMGT 
           _______________________146______________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1g99(A) : RCGSIDPAIVPFLMEKEGLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNK 
         :                                                                                                                          
 1tuu(B) : RCGSIDPAIVPFLMEKEGLTTREIDTLMNKKSGVLGVSGLSNDFRDLDEAASKGNRKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIGIKIDDEKNK 
           ________________________________________________________________________________________________________________________ 

           ____________________383_______________                                                                                   
 1g99(A) : IRGQEIDISTPDAKVRVFVIPTNEELAIARETKEIVET                                                                                   
         :                                                                                                                          
 1tuu(B) : IRGQEIDISTPDAKVRVFVIPTNEELAIARETKEIVET                                                                                   
           ____________________383_______________                                                                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		25.6
Translation
(A) 		-0.5
Closure
(%) 		83.4
Bending Residues
( green ) 		  89 - 90
  100 - 129
  146 - 150
  383 - 385
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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