Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB)
2gvq (A)
  Conformer 2
(PDB)
1o17 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 234 0.7   67 - 153   181 - 201   207 - 236   243 - 341
2 102 0.43   3 - 66   154 - 180   202 - 206   237 - 242

Sequence


           _____________________________________________________________63_________________________________________________________ 
 2gvq(A) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTg---LGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSAD 
         :                                                                                                                          
 1o17(D) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTGGDGLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSAD 
           _____________________________________________________________63_________________________________________________________ 

           __________________________149____________________________180__________________201__206___________________________236___2 
 2gvq(A) : VLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRG 
         :                                                                                                                          
 1o17(D) : VLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRG 
           __________________________149____________________________180__________________201__206___________________________236___2 

           42_______________________________________________________________________________________________________                
 2gvq(A) : IEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKS**                
         :                                                                                                                          
 1o17(D) : IEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKSSG                
           42_______________________________________________________________________________________________________                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.5
Translation
(A)
0.2
Closure
(%)
99.4
Bending Residues
( green )
  63 - 67
  149 - 154
  180 - 181
  201 - 202
  206 - 207
  236 - 237
  242 - 243
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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