Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB)
6ky2 (A)
  Conformer 2
(PDB)
5j99 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 277 1.56   4 - 114   123 - 282   332 - 337
2 73 4.35   115 - 122   283 - 331   338 - 355

Sequence


           ___________________________________________________________________________________________________________________114__ 
 6ky2(A) : HHHHMVDAAVAEKLEAGFQKLQEATNCKSLLKKHLTREIFDKIKDLKTSFGSTLLDVIQSGVENLDSGFGVYAPDAEAYSVFNDLFEPMICDYHTGFKPGDAHPPRDFGDLETFGNLDPE 
         :                                                                                                                          
 5j99(A) : *****VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPA 
           ___________________________________________________________________________________________________________________114__ 

           ___122__________________________________________________________________________________________________________________ 
 6ky2(A) : GAFIVSTRVRCGRSLAGYAFNPCLTEANYKEMEEKVVASLSSLEGELKGTYYPLTGMTKEVQTQLIQDRFLFKEGDRFLQAANACRYWPTGRGIYHNDAKTFLVWCNEEDHLRIISMQKG 
         :                                                                                                                          
 5j99(A) : GQFIISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKG 
           ___122__________________________________________________________________________________________________________________ 

           ___________________________________________282______________________________________________331___337___________________ 
 6ky2(A) : GDLKAVYARLVNAINEIEKRIPFSHHDKYGFLTFCPTNLGTTIRASVHIALPKLAADLAKLa--AGKFNLQVRGTAGEHTEAEGGVYDISNKRRMGLTEYQAVKEMYDGLQELIRMEKEA 
         :                                                                                                                          
 5j99(A) : GDLKTVYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAA 
           ___________________________________________282______________________________________________331___337___________________ 

           _                                                                                                                        
 6ky2(A) : A                                                                                                                        
         :                                                                                                                          
 5j99(A) : A                                                                                                                        
           _                                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
27.7
Translation
(A)
-1.2
Closure
(%)
95.2
Bending Residues
( green )
  114 - 115
  122 - 124
  282 - 283
  331 - 332
  337 - 338
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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