Bbs1 Domain-Containing Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bbs1 Domain-Containing Protein
  Conformer 1
(PDB)
6vbu (1)
  Conformer 2
(PDB)
6vbv (1)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 321 1.34   3 - 424
2 161 0.34   425 - 588

Sequence


           ________________________________________________________________________________________________________________________ 
 6vbu(1) : SKWLDSLSDSMANIHTFSACLALADFHGDGEYKLAMGDLGPDGRQPRLKVLKGHTLVSQKPLPDLPAAAVTFLMASHEPRTPALAIASGPCVYVYKNLKPYFKFSLPSLPrRQTVITTMT 
         :                                                                                                                          
 6vbv(1) : SKWLDSLSDSMANIHTFSACLALADFHGDGEYKLAMGDLGPDGRQPRLKVLKGHTLVSQKPLPDLPAAAVTFLMASHEPRTPALAIASGPCVYVYKNLKPYFKFSLPSLPrRQTVITTMT 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 6vbu(1) : TLKKNLADEDAVSCLVLGTENKELLVLDPEAFTILAKMSLPSVPAFLEASGQFDVEFRLAAACRNGSIYILRRDSKRPKYCIELGAQPVGLVGVHKVLVVGSNQDSLHGFTYKGKRLWTV 
         :                                                                                                                          
 6vbv(1) : TLKKNLADEDAVSCLVLGTENKELLVLDPEAFTILAKMSLPSVPAFLEASGQFDVEFRLAAACRNGSIYILRRDSKRPKYCIELGAQPVGLVGVHKVLVVGSNQDSLHGFTYKGKRLWTV 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________424_____________________________________ 
 6vbu(1) : QMPAAILAMNLLEQHSRGLQAVMAALANEEVRIYHDKVLLNVIRTPEAVTSLCFGRYGREDNTLIMTTLGGGLIIKILKRTAkLNVPRKTRLYVDQTLREREAGTAMHRTFQADLYLLRL 
         :                                                                                                                          
 6vbv(1) : QMPAAILAMNLLEQHSRGLQAVMAALANEEVRIYHDKVLLNVIRTPEAVTSLCFGRYGREDNTLIMTTLGGGLIIKILKRTAkLNVPRKTRLYVDQTLREREAGTAMHRTFQADLYLLRL 
           ________________________________________________________________________________424_____________________________________ 

           ________________________________________________________________________________________________________________________ 
 6vbu(1) : RAARAYVQALESSLSPVSrEPLKLHAVVQGLGPTFKLTLHLQNTSTARPILGLVVCFLYNEVLYALPRAFFKVPLLVPGLNYPLETFVKSLSDKGISDIIKVLVLREGQSTPLLSAHINM 
         :                                                                                                                          
 6vbv(1) : RAARAYVQALESSLSPVSrEPLKLHAVVQGLGPTFKLTLHLQNTSTARPILGLVVCFLYNEVLYALPRAFFKVPLLVPGLNYPLETFVKSLSDKGISDIIKVLVLREGQSTPLLSAHINM 
           ________________________________________________________________________________________________________________________ 

           ______                                                                                                                   
 6vbu(1) : PMSEGL                                                                                                                   
         :                                                                                                                          
 6vbv(1) : PMSEGL                                                                                                                   
           ______                                                                                                                   

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
19.7
Translation
(A)
-0.7
Closure
(%)
89.2
Bending Residues
( green )
  424 - 425
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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