14-3-3 Beta/alpha

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 14-3-3 Beta/alpha
  Conformer 1
(PDB)
2bq0 (B)
  Conformer 2
(PDB)
2c23 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 147 0.88   5 - 114   116 - 156   159 - 159
2 74 1.09   115 - 115   157 - 158   160 - 230

Sequence


           _____________________________________________________________________________________________________________114________ 
 2bq0(B) : MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 
         :                                                                                                                          
 2c23(A) : MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWRVISSIEQK-----kKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFYLK 
           _____________________________________________________________________________________________________________114________ 

           _______________________________156_____________________________________________________________________________          
 2bq0(B) : MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSE          
         :                                                                                                                          
 2c23(A) : MKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTS*          
           _______________________________156_____________________________________________________________________________          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.3
Translation
(A)
1.6
Closure
(%)
87.3
Bending Residues
( green )
  114 - 116
  156 - 160
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download