Bifunctional P-450/nadph-P450 Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional P-450/nadph-P450 Reductase
  Conformer 1
(PDB)
4kf2 (A)
  Conformer 2
(PDB)
5e9z (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 407 0.62   5 - 174   216 - 454
2 39 0.61   175 - 215

Sequence


           ________________________________________________________________________________________________________________________ 
 4kf2(A) : KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI 
         :                                                                                                                          
 5e9z(A) : KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGLVTRYLSSQRLIKEACDGSRFDKNLSQALKFVRDIAGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVDI 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________172_______________________________________214____________________________ 
 4kf2(A) : AVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA--dDPAYDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKDPE 
         :                                                                                                                          
 5e9z(A) : AVQLVQKWERLNADEHIEVPGDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKQQRANPDDPACDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKDPE 
           _______________________________________________172_______________________________________214____________________________ 

           ________________________________________________________________________________________________________________________ 
 4kf2(A) : TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 
         :                                                                                                                          
 5e9z(A) : TGEPLDDENIRYQIITFLIAGHVTTSGLLSFALYFLVKNPYVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDK 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________                            
 4kf2(A) : TIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG                            
         :                                                                                                                          
 5e9z(A) : TIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLSMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLG*                            
           _____________________________________________________________________________________________                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
22.1
Translation
(A)
1.8
Closure
(%)
98.6
Bending Residues
( green )
  172 - 175
  214 - 231
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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