2,3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 2,3-Bisphosphoglycerate-Independent Phosphoglycerate Mutase
  Conformer 1
(PDB)
1o98 (A)
  Conformer 2
(PDB)
2ify (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 269 0.52   5 - 77   313 - 508
2 235 0.74   78 - 312

Sequence


           ________________________________________________________________________75______________________________________________ 
 1o98(A) : SKKPVALIILDGFALRDETYGNAVAQANKPNFDRYWNEYPHTTLKACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVKQHGTSLHLFGLLSDGG 
         :                                                                                                                          
 2ify(A) : *RKPTALIILDGFGLREETYGNAVAQAKKPNFDGYWNKFPHTTLTACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRVNVAIREGEFDKNETFQSAIKSVKEKGTALHLFGLLSDGG 
           ________________________________________________________________________74______________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1o98(A) : VHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIVRE 
         :                                                                                                                          
 2ify(A) : VHSHMNHMFALLRLAAKEGVEKVYIHAFLDGRDVGPKTAQSYIDATNEVIKETGVGQFATISGRYYSMDRDKRWDRVEKCYRAMVNGEGPTYKSAEECVEDSYANGIYDEFVLPSVIVNE 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________310___________________________________________________ 
 1o98(A) : DGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNEDFREFDRGPKHPKHLFFVCLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILIN 
         :                                                                                                                          
 2ify(A) : DNTPVATINDDDAVIFYNFRPDRAIQIARVFTNGDFREFDRGEKVPHIPEFVCMTHFSETVDGYVAFKPMNLDNTLGEVVAQAGLKQLRIAETEKYPHVTFFFSGGREAEFPGEERILIN 
           __________________________________________________________________309___________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1o98(A) : SPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILAKGGIAIITADHGNADEVLTPDGKPQTAHTTNPVPVIVTKKGIKLRDG 
         :                                                                                                                          
 2ify(A) : SPKVATYDLKPEMSIYEVTDALVNEIENDKHDVIILNFANCDMVGHSGMMEPTIKAVEATDECLGKVVEAILAKDGVALITADHGNADEELTSEGEPMTAHTTNPVPFIVTKNDVELRED 
           ________________________________________________________________________________________________________________________ 

           _____________________________                                                                                            
 1o98(A) : GILGDLAPTMLDLLGLPQPKEMTGKSLIV                                                                                            
         :                                                                                                                          
 2ify(A) : GILGDIAPTMLTLLGVEQPKEMTGKTIIK                                                                                            
           _____________________________                                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
63.7
Translation
(A)
-0.9
Closure
(%)
97.0
Bending Residues
( green )
  75 - 79
  310 - 315
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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