Calo1 Methyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Calo1 Methyltransferase
  Conformer 1
(PDB) 		3lst (B)
  Conformer 2
(PDB) 		3lst (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 187 0.67   16 - 175   218 - 221   258 - 261   285 - 311
2 131 0.52   176 - 217   222 - 257   262 - 284   312 - 343

Sequence


           ________________________________________________________________________________________________________________________ 
 3lst(B) : DdRLQSALALYEEAgYTYAAALRAAAAVGVADHLVDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFALTDKGAALRSDSPVPARAGILfTDTfWTsHRVASALGPERPAFA 
         :                                                                                                                          
 3lst(A) : DdRLQSALALYEEAgYTYAAALRAAAAVGVADHLVDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFALTDKGAALRSDSPVPARAGILfTDTfWTsHRVASALGPERPAFA 
           ________________________________________________________________________________________________________________________ 

           __________________________________175_______________________________________217_____________________________________257_ 
 3lst(B) : DIFGSSLDAYFDGDAEVEALYYEGeTVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWG 
         :                                                                                                                          
 3lst(A) : DIFGSSLDAYFDGDAEVEALYYEGeTVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNWG 
           __________________________________175_______________________________________217_____________________________________257_ 

           261___________________284_______________305_______________________________________                                       
 3lst(B) : DEDSVRILTNCRRVpAHGRVLVIDAVVPEGNDAHQSKEdFlAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVsIAVGVPA                                       
         :                                                                                                                          
 3lst(A) : DEDSVRILTNCRRVpAHGRVLVIDAVVPEGNDAHQSKEdFlAARTGQERTAAELEPLFTAAGLRLDRVVGTSSVsIAVGVPA                                       
           261___________________284_______________305_______________________________________                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		8.4
Translation
(A) 		0.2
Closure
(%) 		76.9
Bending Residues
( green ) 		  175 - 181
  217 - 222
  257 - 258
  261 - 262
  284 - 285
  305 - 312
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download