Cyclohexadienyl Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cyclohexadienyl Dehydratase
  Conformer 1
(PDB)
5kkw (A)
  Conformer 2
(PDB)
5wjp (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 130 0.59   18 - 109   205 - 241   247 - 247
2 100 0.52   110 - 204   242 - 246

Sequence


           ______________________________________________________________________________________________109_______________________ 
 5kkw(A) : ESKLDQILSSGELKVGTTGDWDPMAMKDPATNKYKGFDIDVMQELAKDMGVKITFVPTEWKTIVSGITAGRYDISTSVTKTPKRAEVAGFTDSYYKYGTVPLVLKKNLKKYSTWKSLNNK 
         :                                                                                                                          
 5wjp(A) : ESKLDQILSSGELKVGTTGDWDPMAMKDPATNKYKGFDIDVMQELAKDMGVKITFVPTEWKTIVSGITAGRYDISTSVTKTPKRAEVAGFTDSYYKYGTVPLVLKKNLKKYSTWKSLNNK 
           ______________________________________________________________________________________________109_______________________ 

           _____________________________________________________________________204________________________231____________246___    
 5kkw(A) : DVTIATTLGTSQEEKAKEFFPLSKLQSVESPARDFQEVLAGRADGNITSSTEANKLVVKYPQLAIVPDGEKNPAFLAMMVSKNDQVWNDYVNEWIKSKKSSGFFNKLLAKYNLKSLL    
         :                                                                                                                          
 5wjp(A) : DVTIATTLGTSQEEKAKEFFPLSKLQSVESPARDFQEVLAGRADGNITSSTEANKLVVKYPQLAIVPDGEKNPAFLAMMVSKNDQVWNDYVNEWIKSKKSSGFFNKLLAKYNLKSLL    
           _____________________________________________________________________204________________________231____________246___    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.7
Translation
(A)
0.4
Closure
(%)
65.3
Bending Residues
( green )
  109 - 110
  204 - 205
  231 - 242
  246 - 247
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download