Blood Coagulation Factor Xa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Blood Coagulation Factor Xa
  Conformer 1
(PDB)
1xka (L)
  Conformer 2
(PDB)
1xkb (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 54 1.06   84 - 137
2 31 1.01   52 - 83

Sequence


           ________________________________83________________________________________________________                               
 1xka(L) : QCETSPCQNQGKCKgLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER                               
         :                                                                                                                          
 1xkb(B) : *CETSPCQNQGKCKgLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGKQTLER                               
           ________________________________83________________________________________________________                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
21.1
Translation
(A)
-1.1
Closure
(%)
79.2
Bending Residues
( green )
  83 - 85
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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