Exopolyphosphatase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Exopolyphosphatase
  Conformer 1
(PDB)
1t6d (B)
  Conformer 2
(PDB)
1t6c (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 180 0.52   123 - 304
2 111 0.52   11 - 122

Sequence


           _________________________________________________________________________________________________________________122____ 
 1t6d(B) : **IrVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVER-kAVATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLA 
         :                                                                                                                          
 1t6c(A) : PIMRVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVERVKAVATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLA 
           _________________________________________________________________________________________________________________122____ 

           ________________________________________________________________________________________________________________________ 
 1t6d(B) : VAYSLKPEGEV-vVDQGGGSTEYVFGKGYKVREVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKVKKPVDTIVGLGGTITTLAALEYNVYPYDPQKVHGKVLTYGQIKKWFD 
         :                                                                                                                          
 1t6c(A) : VAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVREVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKVKKPVDTIVGLGGTITTLAALEYNVYPYDPQKVHGKVLTYGQIKKWFD 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________________                                                       
 1t6d(B) : TFKEIPSEERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKD-lIVSDWGLREGVLVSEl******                                                       
         :                                                                                                                          
 1t6c(A) : TFKEIPSEERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSEVLKENHS                                                       
           __________________________________________________________________                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.5
Translation
(A)
0.2
Closure
(%)
54.7
Bending Residues
( green )
  122 - 123
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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