Heme Activator Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Heme Activator Protein
  Conformer 1
(PDB)
2hap (D)
  Conformer 2
(PDB)
2hap (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 43 2.44   58 - 100
2 28 1.05   101 - 128

Sequence


           ________________________________________96__________________________________                                             
 2hap(D) : *KRNRIPLRCTICRKRKVKCDKLRPHCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNEVKKLRERVKSLEKTLSK                                             
         :                                                                                                                          
 2hap(C) : RKRNRIPLRCTICRKRKVKCDKLRPHCQQCTKTGVAHLCHYMEQTWAEEAEKELLKDNELKKLRERVKSLEKTLSK                                             
           ________________________________________96__________________________________                                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
137.6
Translation
(A)
-0.4
Closure
(%)
45.9
Bending Residues
( green )
  96 - 102
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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