L-Sulfolactate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name L-Sulfolactate Dehydrogenase
  Conformer 1
(PDB) 		1rfm (G)
  Conformer 2
(PDB) 		1rfm (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 290 0.41   4 - 178   220 - 342
2 41 0.52   179 - 219

Sequence


           ________________________________________________________________________________________________________________________ 
 1rfm(G) : ILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAeLAIKKAKNVGVGVVATRNANHFGIAGY 
         :                                                                                                                          
 1rfm(D) : ILKPENEKKLIIDVLKKFGVPEEDAKITADVFVDADLKGFTSHGIGRFPQYITALKLGNINPKPDIKIVKESPATAVIDGDLGLGQVVGKKAeLAIKKAKNVGVGVVATRNANHFGIAGY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________177_______________________________________219___________________________ 
 1rfm(G) : YSELAnQDiGITITNTEPAaPFGGKEKILGTNPIAIAFKGNKYKFSLDaTASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIElSAIGGAEVGTK 
         :                                                                                                                          
 1rfm(D) : YSELAnQDiGITITNTEPAaPFGGKEKILGTNPIAIAFKGNKYKFSLDaTASIARGKILEALRKKIKIPEGCAVDKDGKPTTDPAKALEGCILPFGGPKGYGLALAIElSAIGGAEVGTK 
           ________________________________________________177_______________________________________219___________________________ 

           _______________________________________________________________________________________________                          
 1rfm(G) : VKGTANPEERCTKGDLFIAINPEFFgKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKkRKDGFEIDKNLYNQLKEICNELGLNIEDYIE                          
         :                                                                                                                          
 1rfm(D) : VKGTANPEERCTKGDLFIAINPEFFgKEEFKRKVDELLDEIKNSEPAEGFEILIPGEIEERNKkRKDGFEIDKNLYNQLKEICNELGLNIEDYIE                          
           _______________________________________________________________________________________________                          

Morph
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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		14.5
Translation
(A) 		0.8
Closure
(%) 		46.2
Bending Residues
( green ) 		  177 - 179
  219 - 220
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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