Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB)
1gxb (C)
  Conformer 2
(PDB)
1o17 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 248 0.55   66 - 153   177 - 177   179 - 341
2 87 0.27   3 - 65   154 - 176   178 - 178

Sequence


           _____________________________________________________________63_________________________________________________________ 
 1gxb(C) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGgLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLEA 
         :                                                                                                                          
 1o17(A) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGgLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSADVLEA 
           _____________________________________________________________63_________________________________________________________ 

           ______________________149______________________174______________________________________________________________________ 
 1gxb(C) : LGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEV 
         :                                                                                                                          
 1o17(A) : LGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEV 
           ______________________149______________________174______________________________________________________________________ 

           _____________________________________________________________________________________________________                    
 1gxb(C) : KLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKSSG                    
         :                                                                                                                          
 1o17(A) : KLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKS**                    
           _____________________________________________________________________________________________________                    

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
11.2
Translation
(A)
0.0
Closure
(%)
100.0
Bending Residues
( green )
  63 - 66
  149 - 155
  174 - 179
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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