Bowman-Birk Type Trypsin Inhibitor

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bowman-Birk Type Trypsin Inhibitor
  Conformer 1
(PDB)
2fj8 (A)
  Conformer 2
(PDB)
1tx6 (J)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 54 0.83   7 - 62
2 54 1.11   63 - 121

Sequence


           _________________________________________________________62_____________________________________________________________ 
 2fj8(A) : KRPWKCCDEAVCTRSIPPICTCMDEVFECPKTCKSCGPSMGDPSRRICQDQYVGDPGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSRSRPSRRVCIDSYFGPVPPRCT 
         :                                                                                                                          
 1tx6(J) : *RPWKCCDEAVCTRSIPPICTCMDEVFEC--tCKSCGPSMGDPSRRICQDQYVGDPGPICRPWECCDKAICTRSNPPTCRCVDEVKKCAPTCKTCLPSr-----RVCIDSYFGPVPPRCT 
           _________________________________________________________62_____________________________________________________________ 

           __                                                                                                                       
 2fj8(A) : **                                                                                                                       
         :                                                                                                                          
 1tx6(J) : PR                                                                                                                       
           __                                                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.0
Translation
(A)
0.7
Closure
(%)
23.2
Bending Residues
( green )
  62 - 63
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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