Invertase/pectin Methylesterase Inhibitor Family Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Invertase/pectin Methylesterase Inhibitor Family Protein
  Conformer 1
(PDB)
1x90 (B)
  Conformer 2
(PDB)
1x8z (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 117 0.62   31 - 147
2 26 2.49   5 - 30

Sequence


           ______________________________30________________________________________________________________________________________ 
 1x90(B) : ****EMSTICDKTLNPSFCLKFLNTKFASANLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRL 
         :                                                                                                                          
 1x8z(A) : MDSSEMSTICDKTLNPSFCLKFLNTKFASPNLQALAKTTLDSTQARATQTLKKLQSIIDGGVDPRSKLAYRSCVDEYESAIGNLEEAFEHLASGDGMGMNMKVSAALDGADTCLDDVKRL 
           ______________________________30________________________________________________________________________________________ 

           _______________________________                                                                                          
 1x90(B) : RSVDSSVVNNSKTIKNLCGIALVISNMLPRN                                                                                          
         :                                                                                                                          
 1x8z(A) : RSVDSSVVNNSKTIKNLCGIALVISNMLPRN                                                                                          
           _______________________________                                                                                          

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
72.7
Translation
(A)
-3.1
Closure
(%)
43.5
Bending Residues
( green )
  30 - 32
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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