Chemotaxis Protein Chex

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Protein Chex
  Conformer 1
(PDB)
1xko (A)
  Conformer 2
(PDB)
1squ (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 86 1.08   17 - 59   104 - 149
2 56 0.94   5 - 16   60 - 103

Sequence


           _______________16_________________________________________59_________________________________________103________________ 
 1xko(A) : MMDARIVNALIGSVYETIRDVLGIEPKTGKPSTVSHIEIPHSLVTVIGITGGIEGSLIYSFSSETALKVVSAMMGGMEYNQLDELALSAIGELGNMTAGKLAMKLEH---hVDITPPTVV 
         :                                                                                                                          
 1squ(B) : *MDARIVNALIGSVYETIRDVLGIEPKTGKPSTVSHIEIPHSLVTVIGITGGIEGSLIYSFSSETALKVVSAMMGGMEYNQLDELALSAIGELGNMTAGKLAMKLEHLGKHVDITPPTVV 
           _______________16_________________________________________59_________________________________________103________________ 

           ___________________________________                                                                                      
 1xko(A) : SGRDLKIKSFGVILKLPISVFSEEDFDLHLSVK**                                                                                      
         :                                                                                                                          
 1squ(B) : SGRDLKIKSFGVILKLPISVFSEEDFDLHLSVKSG                                                                                      
           ___________________________________                                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.9
Translation
(A)
-1.1
Closure
(%)
94.4
Bending Residues
( green )
  16 - 18
  59 - 60
  103 - 110
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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