Endo-Beta-1,4-Glucanase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Endo-Beta-1,4-Glucanase
  Conformer 1
(PDB)
1oa2 (B)
  Conformer 2
(PDB)
1olq (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 117 0.62   65 - 80   95 - 165   170 - 196   199 - 200   216 - 216
2 96 0.5   4 - 64   81 - 94   166 - 169   197 - 198   201 - 215

Sequence


           _____________________________________________________________64______________80____________94___________________________ 
 1oa2(B) : TSCDQWATFTGNGYTVSNNLWGASAGSGFGCVTVVSLSGGASWHADWQWSGGQNNVKSYQNSQIAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAANPNHVTYSGDYELMIWL 
         :                                                                                                                          
 1olq(A) : TSCDQWATFTGNGYTVSNNLWGASAGSGFGCVTAVSLSGGASWHADWQWSGGQNNVKSYQNSQIAIPQKRTVNSISSMPTTASWSYSGSNIRANVAYDLFTAANPNHVTYSGDYELMIWL 
           _____________________________________________________________64______________80____________94___________________________ 

           _________________________________________165_169________________________196________________215___                        
 1oa2(B) : GKYGDIGPIGSSQGTVNVGGQSWTLYYGYNGAMQVYSFVAQTNTTNYSGDVKNFFNYLRDNKGYNAAGQYVLSYQFGTEPFTGSGTLNVASWTASIN                        
         :                                                                                                                          
 1olq(A) : GKYGDIGPIGSSQGTVNVGGQSWTLYYGYNGAMQVYSFVAQTNTTNYSGDVKNFFNYLRDNKGYNAAGQYVLSYQFGTECFTGSGTLNVASWTASIN                        
           _________________________________________165_169________________________196________________215___                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.3
Translation
(A)
-0.1
Closure
(%)
87.8
Bending Residues
( green )
  64 - 65
  80 - 81
  94 - 95
  165 - 166
  169 - 170
  196 - 201
  215 - 216
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download