Abc-Type Fe3+ Transport System, Periplasmic Component

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Abc-Type Fe3+ Transport System, Periplasmic Component
  Conformer 1
(PDB) 		4r72 (A)
  Conformer 2
(PDB) 		4r73 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 159 0.8   105 - 228   282 - 316
2 155 0.4   3 - 104   229 - 281

Sequence


           _______________________________________________________________________________________________________104______________ 
 4r72(A) : **KGRLVIYCSATNVMCENAAKTFEQKYDVKTSFIRNGSGSTFAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQDPAKVKGNLSSAVYIGILGFAVNTERLKK 
         :                                                                                                                          
 4r73(A) : GSKGRLVIYCSATNVMCENAAKTFEQKYDVKTSFIRNGSGSTFAKIEAEKNNPQADVWYGGTLDPQSQAGELGLLEAYRSPNIDQIMPKFQDPAKVKGNLSSAVYIGILGFAVNTERLKK 
           _______________________________________________________________________________________________________104______________ 

           ___________________________________________________________________________________________________________228__________ 
 4r72(A) : LGIEKIPQCWNDLTDPKLKGEIQIADPQSSGTAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHDYALEKEQGAPLEMVVPCEGTGYELGGVSILKG 
         :                                                                                                                          
 4r73(A) : LGIEKIPQCWNDLTDPKLKGEIQIADPQSSGTAYTAIATFAQLWGEDKAFDYFKHLHPNISQYTKSGITPARNAARGETTVGIGFLHDYALEKEQGAPLEMVVPCEGTGYELGGVSILKG 
           ___________________________________________________________________________________________________________228__________ 

           _____________________________________278_________________________________________                                        
 4r72(A) : ARNLDNAKLFVDFALSKEGQETAWKKGQALQTLTNTTAEQSPLAFDLTKLKLIDYDFEKYGASDERKRLINKWVDEIKLA*                                        
         :                                                                                                                          
 4r73(A) : ARNLDNAKLFVDFALSKEGQETAWKKGQALQTLTNTTAEQSPLAFDLTKLKLIDYDFEKYGASDERKRLINKWVDEIKLAK                                        
           _____________________________________278_________________________________________                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		38.7
Translation
(A) 		0.0
Closure
(%) 		99.9
Bending Residues
( green ) 		  104 - 106
  228 - 230
  278 - 287
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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