Acrb

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acrb
  Conformer 1
(PDB)
2dhh (B)
  Conformer 2
(PDB)
2dhh (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 758 2.21   3 - 37   137 - 153   169 - 180   182 - 287   293 - 305   307 - 311   313 - 315   320 - 570   573 - 576   583 - 586   589 - 613   629 - 672   726 - 811   868 - 1034
2 260 2.59   38 - 136   154 - 168   181 - 181   288 - 292   306 - 306   312 - 312   316 - 319   571 - 572   577 - 582   587 - 588   614 - 628   673 - 725   812 - 867

Sequence


           ___________________________________37___________________________________________________________________________________ 
 2dhh(B) : MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 
         :                                                                                                                          
 2dhh(C) : MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADIAQVQVQNKLQLAMPLLPQ 
           ___________________________________37___________________________________________________________________________________ 

           _____________136______________153____________168_________180____________________________________________________________ 
 2dhh(B) : EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 
         :                                                                                                                          
 2dhh(C) : EVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL 
           _____________136______________153____________168_________180____________________________________________________________ 

           ____________________________________________287__292__________305___311_315_319_________________________________________ 
 2dhh(B) : TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 
         :                                                                                                                          
 2dhh(C) : TSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYDIIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQ 
           ____________________________________________287__292__________305___311_315_319_________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2dhh(B) : NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 
         :                                                                                                                          
 2dhh(C) : NFRATLIPTIAVPVVLLGTFAVLAAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________________________________570___576___582_586________________________613_ 
 2dhh(B) : SVLVALILTPALCATMLKfGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNG 
         :                                                                                                                          
 2dhh(C) : SVLVALILTPALCATMLKfGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPDEDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNG 
           _________________________________________________________________________570___576___582_586________________________613_ 

           ___________628_____________________________________668______________________________________________________725_________ 
 2dhh(B) : FGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQE 
         :                                                                                                                          
 2dhh(C) : FGFAGRGQNTGIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDFELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQE 
           ___________628_____________________________________668______________________________________________________725_________ 

           __________________________________________________________________________811___________________________________________ 
 2dhh(B) : KAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTG 
         :                                                                                                                          
 2dhh(C) : KAQALGVSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTG 
           __________________________________________________________________________811___________________________________________ 

           __________867___________________________________________________________________________________________________________ 
 2dhh(B) : VGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRP 
         :                                                                                                                          
 2dhh(C) : VGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRP 
           __________867___________________________________________________________________________________________________________ 

           ______________________________________________________________                                                           
 2dhh(B) : ILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRK                                                           
         :                                                                                                                          
 2dhh(C) : ILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRRRFSRK                                                           
           ______________________________________________________________                                                           

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.8
Translation
(A)
-0.6
Closure
(%)
59.5
Bending Residues
( green )
  37 - 38
  136 - 137
  153 - 154
  168 - 169
  180 - 182
  287 - 288
  292 - 293
  305 - 307
  311 - 313
  315 - 316
  319 - 320
  570 - 573
  576 - 577
  582 - 583
  586 - 589
  613 - 614
  628 - 629
  668 - 679
  725 - 726
  811 - 812
  867 - 877
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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