Aldose Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aldose Reductase
  Conformer 1
(PDB)
1ef3 (B)
  Conformer 2
(PDB)
1xgd (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 263 0.77   3 - 211   238 - 239   251 - 259   267 - 277   282 - 313
2 48 3.07   212 - 237   240 - 250   260 - 266   278 - 281

Sequence


           ________________________________________________________________________________________________________________________ 
 1ef3(B) : ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKE 
         :                                                                                                                          
 1xgd(A) : ASRLLLNNGAKMPILGLGTWKSPPGQVTEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKE 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________209_________________________237___ 
 1ef3(B) : FFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKH 
         :                                                                                                                          
 1xgd(A) : FFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKH 
           ______________________________________________________________________________________209_________________________237___ 

           _______250______259____266________277_281__________________________________                                              
 1ef3(B) : NKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTSHKDYPFHEEF                                              
         :                                                                                                                          
 1xgd(A) : NKTTAQVLIRFPMQRNLVVIPKSVTPEAIAENFKVFDFELSSQDMTTLLSYNRNWRVCALLSCTSHKDYPFHEEF                                              
           _______250______259____266________277_281__________________________________                                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
22.4
Translation
(A)
-0.7
Closure
(%)
76.6
Bending Residues
( green )
  209 - 212
  237 - 240
  250 - 251
  259 - 260
  266 - 271
  277 - 278
  281 - 284
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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