Biotin Carboxylase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Biotin Carboxylase
  Conformer 1
(PDB)
1bnc (A)
  Conformer 2
(PDB)
1dv2 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 369 0.56   3 - 131   205 - 444
2 60 1.83   132 - 204

Sequence


           ________________________________________________________________________________________________________________________ 
 1bnc(A) : *MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSA 
         :                                                                                                                          
 1dv2(B) : HMLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIFIGPKAETIRLMGDKVSA 
           ________________________________________________________________________________________________________________________ 

           ______128_________________________________________________________________________204___________________________________ 
 1bnc(A) : IAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIK-------rGMRVVRGDAELAQSISMTRAEAK------mVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKV 
         :                                                                                                                          
 1dv2(B) : IAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKASGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADGQGNAIYLAERDCSMQRRHQKV 
           ______128_________________________________________________________________________204___________________________________ 

           ________________________________________________________________________________________________________________________ 
 1bnc(A) : VEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHA 
         :                                                                                                                          
 1dv2(B) : VEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFEFLFENGEFYFIKMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAEDPNTFLPSPGKITRFHA 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________                                 
 1bnc(A) : PGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGL*                                 
         :                                                                                                                          
 1dv2(B) : PGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQ                                 
           ________________________________________________________________________________________                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
47.7
Translation
(A)
0.8
Closure
(%)
95.7
Bending Residues
( green )
  128 - 132
  204 - 207
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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