Carminomycin 4-O-Methyltransferase Dnrk

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Carminomycin 4-O-Methyltransferase Dnrk
  Conformer 1
(PDB) 		5jr3 (B)
  Conformer 2
(PDB) 		5jr3 (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 196 0.46   15 - 141   144 - 160   162 - 164   166 - 167   252 - 256   284 - 313   335 - 346
2 140 0.3   142 - 143   161 - 161   165 - 165   168 - 251   257 - 283   314 - 334   347 - 350

Sequence


           ________________________________________________________________________________________________________________________ 
 5jr3(B) : ***QIDALRTLIRLGSLHTPMVVRTAATLRLVDHILAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRT 
         :                                                                                                                          
 5jr3(C) : RPQQIDALRTLIRLGSLHTPMVVRTAATLRLVDHILAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRT 
           ________________________________________________________________________________________________________________________ 

           _________141_______________159__164____________________________________________________________________________________2 
 5jr3(B) : GRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAI 
         :                                                                                                                          
 5jr3(C) : GRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAI 
           _________141_______________159__164____________________________________________________________________________________2 

           51__256________________________283__________________________312___________________334_________346_______                 
 5jr3(B) : ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPA*                 
         :                                                                                                                          
 5jr3(C) : ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPAA                 
           51__256________________________283__________________________312___________________334_________346_______                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.8
Translation
(A) 		0.3
Closure
(%) 		32.5
Bending Residues
( green ) 		  141 - 144
  159 - 162
  164 - 168
  251 - 252
  256 - 257
  283 - 284
  312 - 314
  334 - 343
  346 - 347
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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