Dehydroascorbate Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Dehydroascorbate Reductase
  Conformer 1
(PDB)
5d9t (A)
  Conformer 2
(PDB)
5lol (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 156 0.59   25 - 40   64 - 204
2 28 1.95   20 - 24   41 - 63

Sequence


           _____________________24__28_________________________________63__________________________________________________________ 
 5d9t(A) : GVEVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVQNKPDWFLKISPEGKVPVFNGGDGKWIPDSDVITQVIEEKYPTPSLVTPPEYASVGSKIFSCFTTFLKSKDPNDGSE 
         :                                                                                                                          
 5lol(A) : ***ICVKVAVGAPDVLGDCPFSQRVLLTLEEKKLPYKTHLINVSDKPQWFLDISPEGKVPVVKL-DGKWVADSDVIVGLLEEKYPEPSLKTPPEFASVGSKIFGAFVTFLKSKDANDGSE 
           _____________________24__28_________________________________63__________________________________________________________ 

           ____________________________________________________________________________________________                             
 5d9t(A) : KALLTELQALEEHLKAH-GPFINGQNISAADLSLAPKLYHLQVALEHFKGWKIPEDLTNVHAYTEALFSRESFIKTKAAKEHLIAGWAPKVN                             
         :                                                                                                                          
 5lol(A) : KALVDELEALENHLKTHSGPFVAGEKITAVDLSLAPKLYHLEVALGHYKNWSVPESLTSVRNYAKALFSRESFENTKAKKEIVVAGWESKV*                             
           ____________________________________________________________________________________________                             

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.6
Translation
(A)
0.5
Closure
(%)
98.1
Bending Residues
( green )
  24 - 25
  28 - 41
  63 - 65
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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