Alcohol Dehydrogenase 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Alcohol Dehydrogenase 1
  Conformer 1
(PDB) 		4w6z (A)
  Conformer 2
(PDB) 		4w6z (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 181 0.92   3 - 95   100 - 104   111 - 156   267 - 270   296 - 297   315 - 345
2 162 0.95   96 - 99   105 - 110   157 - 266   271 - 295   298 - 314

Sequence


           ____________________________________________________________________________________________94_______104___110__________ 
 4w6z(A) : SIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 
         :                                                                                                                          
 4w6z(B) : SIPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYT 
           ____________________________________________________________________________________________94_______104___110__________ 

           _________________________________156____________________________________________________________________________________ 
 4w6z(A) : HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 
         :                                                                                                                          
 4w6z(B) : HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 
           _________________________________156____________________________________________________________________________________ 

           _______________________266_270______________________295________________314_________________________________              
 4w6z(A) : GVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK              
         :                                                                                                                          
 4w6z(B) : GVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK              
           _______________________266_270______________________295________________314_________________________________              

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		12.5
Translation
(A) 		-0.3
Closure
(%) 		94.4
Bending Residues
( green ) 		  94 - 100
  104 - 105
  110 - 111
  156 - 157
  266 - 267
  270 - 274
  295 - 298
  314 - 316
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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