Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB)
6ky2 (A)
  Conformer 2
(PDB)
4bhl (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 314 1.29   3 - 288   322 - 322   328 - 354
2 28 1.68   289 - 321   323 - 327

Sequence


           ________________________________________________________________________________________________________________________ 
 6ky2(A) : HHHHMVDAAVAEKLEAGFQKLQEATNCKSLLKKHLTREIFDKIKDLKTSFGSTLLDVIQSGVENLDSGFGVYAPDAEAYSVFNDLFEPMICDYHTGFKPGDAHPPRDFGDLETFGNLDPE 
         :                                                                                                                          
 4bhl(A) : ****MADAAVIEKLEAGFKKLEAATDCKSLLKKYLTKEVFDKLKDKRTSLGATLLDVIQSGVENLDSGVGIYAPDAEAYTLFAPLFDPIIEDYHVGFKQTDKHPNKDFGDVNSFVNVDPE 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 6ky2(A) : GAFIVSTRVRCGRSLAGYAFNPCLTEANYKEMEEKVVASLSSLEGELKGTYYPLTGMTKEVQTQLIQDRFLFKEGDRFLQAANACRYWPTGRGIYHNDAKTFLVWCNEEDHLRIISMQKG 
         :                                                                                                                          
 4bhl(A) : GKFVISTRVRCGRSMQGYPFNPCLTESQYKEMEAKVSSTLSSLEGELKGTYYPLTGMSKEVQQKLIDDHFLFKEGDRFLQAANACRYWPAGRGIYHNDNKTFLVWVNEEDHLRIISMQMG 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________282____________________________________321___327_____________________________ 
 6ky2(A) : GDLKAVYARLVNAINEIEKRIPFSHHDKYGFLTFCPTNLGTTIRASVHIALPKLAADLAKL--aAGKFNLQVRGTAGEHTEAEGGVYDISNKRRMGLTEYQAVKEMYDGLQELIRMEKEA 
         :                                                                                                                          
 4bhl(A) : GDLGQVFRRLTSAVNEIEKRIPFSHHDRLGFLTFCPTNLGTTVRASVHIKLPKLAANEEKLEEVAGKYNLQVRGT--------gGIYDISNKRRMGLTEFQAVKEMEDGILELIKIEKEM 
           ___________________________________________282____________________________________321___327_____________________________ 

           _                                                                                                                        
 6ky2(A) : A                                                                                                                        
         :                                                                                                                          
 4bhl(A) : *                                                                                                                        
           _                                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
23.5
Translation
(A)
-0.2
Closure
(%)
87.4
Bending Residues
( green )
  282 - 289
  321 - 323
  327 - 329
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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