Beta-Arrestin-2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Arrestin-2
  Conformer 1
(PDB)
5tv1 (A)
  Conformer 2
(PDB)
3p2d (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 310 3.15   11 - 63   77 - 241   250 - 346
2 21 3.31   64 - 76   242 - 249

Sequence


           ________________________________________________________63__________75__________________________________________________ 
 5tv1(A) : **RVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGREDLDVLGLSFRKDLFIANYQAFPPTPNPPRPPTRLQERLLRKLGQHAHPFFFTIPQNLP 
         :                                                                                                                          
 3p2d(A) : GTRVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGREDLDVLGLSFRKDLFIANYQAFPPTPNPPRPPTRLQERLLRKLGQHAHPFFFTIPQNLP 
           ________________________________________________________63__________75__________________________________________________ 

           _________________________________________________________________________________________________________________241____ 
 5tv1(A) : CSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLF 
         :                                                                                                                          
 3p2d(A) : CSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLF 
           _________________________________________________________________________________________________________________241____ 

           _249______________________________________________________________________________________________________________       
 5tv1(A) : STAQYKCPVAQVEQDDQVSPSSTFCKVYTITPLLSNNREKRGLALDGKLKHEDTNLASSTIVkE-----VLGILVSYRVKVKLVVSRGGDVSVELPFVLMHPKP**********       
         :                                                                                                                          
 3p2d(A) : STAQYKCPVAQVEQDDQVSPSSTFCKVYTITPLLSNNREKRGLALDGKLKHEDTNLASSTIVKEGANKEVLGILVSYRVKVKLVVSRGGDVSVELPFVLMHPKPHdIVFEDFAR       
           _249______________________________________________________________________________________________________________       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
39.1
Translation
(A)
-1.2
Closure
(%)
69.9
Bending Residues
( green )
  63 - 64
  75 - 77
  241 - 242
  249 - 250
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download