Bifunctional Udp-N-Acetylglucosamine 2-Epimerase/n- Acetylmannosamine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional Udp-N-Acetylglucosamine 2-Epimerase/n- Acetylmannosamine Kinase
  Conformer 1
(PDB)
3eo3 (A)
  Conformer 2
(PDB)
2yhy (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 170 0.7   517 - 526   529 - 530   534 - 557   559 - 560   564 - 700
2 109 0.66   408 - 516   527 - 528   531 - 533   558 - 558   561 - 563   701 - 715

Sequence


           _____________________________________________________________________________________________________________516_______5 
 3eo3(A) : *TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGIST------------------------dLRTPLSDTLHLPVWVDNDGNCAALA 
         :                                                                                                                          
 2yhy(A) : GTLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALA 
           _____________________________________________________________________________________________________________516_______5 

           26____533_____________________557___563_________________________________________________________________________________ 
 3eo3(A) : ERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSVPKDEAVGALHLIQAAKLGNAKAQSILRT 
         :                                                                                                                          
 2yhy(A) : ERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMS-----aVGALHLIQAAKLGNAKAQSILRT 
           26____533_____________________557___563_________________________________________________________________________________ 

           _____________________________________________________700_________________                                                
 3eo3(A) : AGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT                                                
         :                                                                                                                          
 2yhy(A) : AGTALGLGVVNILHTMNPSLVILSGVLASHYIHIVKDVIRQQALSSVQDVDVVVSDLVDPALLGAASMVLDYT                                                
           _____________________________________________________700_________________                                                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.3
Translation
(A)
-0.1
Closure
(%)
98.9
Bending Residues
( green )
  516 - 517
  526 - 531
  533 - 534
  557 - 561
  563 - 564
  700 - 701
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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