Bisphosphoglycerate Mutase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bisphosphoglycerate Mutase
  Conformer 1
(PDB) 		2h4z (B)
  Conformer 2
(PDB) 		3nfy (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 225 1.17   4 - 98   119 - 248
2 20 0.74   99 - 118

Sequence


           _____________________________________________________________________________________________96___________________118___ 
 2h4z(B) : SKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNV 
         :                                                                                                                          
 3nfy(B) : SKYKLIMLRHGEGAWNKENRFCSWVDQKLNSEGMEEARNCGKQLKALNFEFDLVFTSVLNRSIHTAWLILEELGQEWVPVESSWRLNERHYGALIGLNREQMALNHGEEQVRLWRRSYNV 
           _____________________________________________________________________________________________96___________________118___ 

           ________________________________________________________________________________________________________________________ 
 2h4z(B) : TPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI 
         :                                                                                                                          
 3nfy(B) : TPPPIEESHPYYQEIYNDRRYKVCDVPLDQLPRSESLKDVLERLLPYWNERIAPEVLRGKTILISAHGNSSRALLKHLEGISDEDIINITLPTGVPILLELDENLRAVGPHQFLGDQEAI 
           ________________________________________________________________________________________________________________________ 

           ______________                                                                                                           
 2h4z(B) : QAAIKKVEDQGKVK                                                                                                           
         :                                                                                                                          
 3nfy(B) : QAAIKKVED*****                                                                                                           
           ______________                                                                                                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		44.4
Translation
(A) 		0.1
Closure
(%) 		97.8
Bending Residues
( green ) 		  96 - 99
  118 - 123
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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