Calmodulin-Sensitive Adenylate Cyclase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Calmodulin-Sensitive Adenylate Cyclase
  Conformer 1
(PDB)
1k8t (A)
  Conformer 2
(PDB)
1k93 (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 276 0.67   294 - 501   549 - 627
2 34 2.62   502 - 535
3 118 3.97   652 - 773

Sequence


           ________________________________________________________________________________________________________________________ 
 1k8t(A) : DRIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRI 
         :                                                                                                                          
 1k93(C) : *RIDVLKGEKALKASGLVPEHADAFKKIARELNTYILFRPVNKLATNLIKSGVATKGLNVHGKSSDWGPVAGYIPFDQDLSKKHGQQLAVEKGNLENKKSITEHEGEIGKIPLKLDHLRI 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________________________________________499_______________________________ 
 1k8t(A) : EELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVT 
         :                                                                                                                          
 1k93(C) : EELKENGIILKGKKEIDNGKKYYLLESNNQVYEFRISDENNEVQYKTKEGKITVLGEKFNWRNIEVMAKNVEGVLKPLTADYDLFALAPSLTEIKKQIPQKEWDKVVNTPNSLEKQKGVT 
           ______________________________________________________________________________________499_______________________________ 

           __535________________________________________________________________________________________626________________________ 
 1k8t(A) : NLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGT-----------nEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPIT 
         :                                                                                                                          
 1k93(C) : NLLIKYGIERKPDSTKGTLSNWQKQMLDRLNEAVKYTGYTGGDVVNHGTEQDNEEFPEKDNEIFIINPEGEFILTKNWEMTGRFIEKNITGKDYLYYFNRSYNKIAPGNKAYIEWTDPIT 
           __535________________________________________________________________________________________626________________________ 

           ________________________________________________________________________________________________________________________ 
 1k8t(A) : KAKINTIPTSAEFIKNLSSIRRSSNVGVYKDSGDKDEFAKKESVKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQKSN 
         :                                                                                                                          
 1k93(C) : KAKINTIPTSAEFIKNLSSIRRSSNVGVYKDSGDKDEFAKKESVKKIAGYLSDYYNSANHIFSQEKKRKISIFRGIQAYNEIENVLKSKQIAPEYKNYFQYLKERITNQVQLLLTHQK-- 
           ________________________________________________________________________________________________________________________ 

           _____________________________                                                                                            
 1k8t(A) : IEFKLLYKQLNFTENETDNFEVFQKIIDE                                                                                            
         :                                                                                                                          
 1k93(C) : --fKLLYKQLNFTENETDNFEVFQKIID*                                                                                            
           _____________________________                                                                                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
39.4
Translation
(A)
1.3
Closure
(%)
83.0
Bending Residues
( green )
  499 - 502
  535 - 549
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
33.0
Translation
(A)
1.5
Closure
(%)
87.6
Bending Residues
( green )
  626 - 654
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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