Maltose Transport Protein Malk

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Maltose Transport Protein Malk
  Conformer 1
(PDB)
1g29 (1)
  Conformer 2
(PDB)
1g29 (2)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 300 0.38   3 - 86   155 - 370
2 68 1.3   87 - 154

Sequence


           _________________________________________________________________________________83_____________________________________ 
 1g29(1) : MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 
         :                                                                                                                          
 1g29(2) : MAGVRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIAFPLKLRKVPRQEIDQRV 
           _________________________________________________________________________________83_____________________________________ 

           _______________________________154______________________________________________________________________________________ 
 1g29(1) : REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 
         :                                                                                                                          
 1g29(2) : REVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDKPANTFVAGFI 
           _______________________________154______________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1g29(1) : GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVRLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKI 
         :                                                                                                                          
 1g29(2) : GSPPMNFLDAIVTEDGFVDFGEFRLKLLPDQFEVLGELGYVGREVIFGIRPEDLYDAMFAQVRVPGENLVRAVVEIVENLGSERIVRLRVGGVTFVGSFRSESRVREGVEVDVVFDMKKI 
           ________________________________________________________________________________________________________________________ 

           ____________                                                                                                             
 1g29(1) : HIFDKTTGKAIF                                                                                                             
         :                                                                                                                          
 1g29(2) : HIFDKTTGKAIF                                                                                                             
           ____________                                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
25.8
Translation
(A)
-0.9
Closure
(%)
77.0
Bending Residues
( green )
  83 - 95
  154 - 167
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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